Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs2271908 | chr10:75012122 | A/G | 4.52E-12 | 214 | 16.53 | 11.77 | 5.6 | KM Plot |
| KIRP | rs2275935 | chr10:70481214 | C/T | 9.94E-8 | 214 | 17.08 | 14.32 | 11.47 | KM Plot |
| KIRP | rs2292307 | chr10:75549916 | C/A | 0 | 214 | 15.88 | 18.72 | 2.47 | KM Plot |
| KIRP | rs2297024 | chr1:89582474 | A/T | 3.5E-5 | 209 | 9.38 | 18.7 | 16.43 | KM Plot |
| KIRP | rs2303275 | chr16:74499589 | G/A | 0.000373 | 213 | 14.53 | 18.47 | 17.13 | KM Plot |
| KIRP | rs2305252 | chr15:28267338 | C/T | 0.000113 | 214 | 15.33 | 16.93 | 7.65 | KM Plot |
| KIRP | rs2305386 | chr10:102048269 | G/A | 3.76E-7 | 213 | 15.88 | 19.83 | 5.7 | KM Plot |
| KIRP | rs2306325 | chr10:75506674 | T/C | 0 | 210 | 16.47 | 15.07 | 2.47 | KM Plot |
| KIRP | rs2311392 | chr11:8490436 | A/C | 0.000581 | 211 | 15.88 | 17.2 | 4.82 | KM Plot |
| KIRP | rs2319196 | chr14:20909816 | G/A | 0.000662 | 208 | 14.47 | 19.87 | 9.25 | KM Plot |
| KIRP | rs2326411 | chr6:4167439 | C/A | 8.27E-5 | 212 | 14.1 | 19.3 | 12.38 | KM Plot |
| KIRP | rs2341178 | chr8:30098195 | C/T | 0.000101 | 211 | 14.8 | 18.98 | 9 | KM Plot |
| KIRP | rs2354071 | chr15:24526294 | C/T | 0.000133 | 209 | 17.52 | 13.78 | 10.23 | KM Plot |
| KIRP | rs2355906 | chr16:20475679 | C/T | 0.000386 | 211 | 16.43 | 13.6 | 5.88 | KM Plot |
| KIRP | rs2356552 | chr1:46009316 | T/C | 8.53E-7 | 210 | 7.57 | 16.53 | 15.33 | KM Plot |